recipe synapseclient

Python client for Synapse

Homepage:

https://www.synapse.org

Documentation:

https://python-docs.synapse.org/

Developer docs:

https://github.com/Sage-Bionetworks/synapsePythonClient

License:

APACHE / Apache-2.0

Recipe:

/synapseclient/meta.yaml

A client for Synapse, a collaborative compute space that allows scientists to share and analyze data together.

package synapseclient

versions:

4.5.0-0,  4.4.1-0,  4.4.0-0,  4.3.1-0,  4.3.0-0,  4.2.0-0,  4.1.1-0,  4.1.0-0,  4.0.0-0, 

4.5.0-0,  4.4.1-0,  4.4.0-0,  4.3.1-0,  4.3.0-0,  4.2.0-0,  4.1.1-0,  4.1.0-0,  4.0.0-0,  3.2.0-0,  3.1.1-0,  3.1.0-0,  3.0.0-0,  2.7.2-0,  2.7.1-0,  2.7.0-0,  2.6.0-0,  2.5.1-0,  2.5.0-0,  2.4.0-0,  2.3.1-0,  2.3.0-0,  2.2.2-0,  2.2.0-0,  2.1.1-0,  2.1.0-0,  2.0.0-0,  1.9.4-0,  1.9.3-0,  1.7.5-1,  1.7.5-0,  1.7.1-0,  1.6.2-0,  1.5-0

depends async-lru:

depends asyncio-atexit:

depends deprecated:

>=1.2.4

depends httpx:

depends loky:

depends nest-asyncio:

depends opentelemetry-api:

depends opentelemetry-exporter-otlp-proto-http:

depends opentelemetry-sdk:

depends psutil:

depends python:

>=3.8

depends requests:

>=2.22

depends tqdm:

depends urllib3:

<2

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install synapseclient

and update with::

   mamba update synapseclient

To create a new environment, run:

mamba create --name myenvname synapseclient

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/synapseclient:<tag>

(see `synapseclient/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/synapseclient/README.html)