takeabreak

downloads

tool that can detect inversion breakpoints directly from raw NGS reads, without the need of any reference genome and without de novo assembling the genomes

Home https://colibread.inria.fr/software/takeabreak/
Versions 1.1.2
License GNU Affero General Public License
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/takeabreak

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install takeabreak

and update with:

conda update takeabreak

docker

A Docker container is available at https://quay.io/repository/biocontainers/takeabreak.