recipe tassel

TASSEL is a software package to evaluate traits associations, evolutionary patterns, and linkage disequilibrium.

Homepage:

https://www.maizegenetics.net/tassel

License:

LGPL V2.1

Recipe:

/tassel/meta.yaml

package tassel

(downloads) docker_tassel

versions:

5.2.89-0,  5.2.40-3,  5.2.40-2,  5.2.40-1,  5.2.40-0,  4.3.15-1,  4.3.15-0,  3.0.174-1,  3.0.174-0

depends openjdk:

>=8.0

depends perl:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install tassel

and update with::

   mamba update tassel

To create a new environment, run:

mamba create --name myenvname tassel

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/tassel:<tag>

(see `tassel/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/tassel/README.html)