recipe telosearchlr

TeloSearchLR (telomere search using long sequencing reads) is a Python script for aiding the identificaiton of telomeric repeat motifs.

Homepage:

https://github.com/gchchung/TeloSearchLR

License:

Academic and Non-Commercial Research Use

Recipe:

/telosearchlr/meta.yaml

package telosearchlr

versions:

1.0.1-0

depends bio:

depends pillow:

depends plotly:

depends python:

>=3.9

depends svgutils:

depends tidehunter:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install telosearchlr

and update with::

   mamba update telosearchlr

To create a new environment, run:

mamba create --name myenvname telosearchlr

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/telosearchlr:<tag>

(see `telosearchlr/tags`_ for valid values for ``<tag>``)

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