recipe terminus

Terminus enables the discovery of data-driven, robust transcript groups from RNA-seq data

Homepage:

https://github.com/COMBINE-lab/terminus

License:

BSD 3-Clause

Recipe:

/terminus/meta.yaml

package terminus

versions:

0.1.0-7,  0.1.0-6,  0.1.0-5,  0.1.0-4,  0.1.0-3,  0.1.0-2,  0.1.0-1,  0.1.0-0,  v0.1.0-0

depends gsl:

>=2.7,<2.8.0a0

depends libblas:

>=3.9.0,<4.0a0

depends libcblas:

>=3.9.0,<4.0a0

depends libgcc-ng:

>=12

depends libstdcxx-ng:

>=12

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install terminus

and update with::

   mamba update terminus

To create a new environment, run:

mamba create --name myenvname terminus

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/terminus:<tag>

(see `terminus/tags`_ for valid values for ``<tag>``)

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