recipe tgsgapcloser

A gap-closing software tool that uses error-prone long reads generated by third-generation-sequence techniques (Pacbio, Oxford Nanopore, etc.) or preassembled contigs to fill N-gap in the genome assembly.

Homepage

https://github.com/BGI-Qingdao/TGS-GapCloser

License

GPL-3.0-only

Recipe

/tgsgapcloser/meta.yaml

package tgsgapcloser

(downloads) docker_tgsgapcloser

Versions

1.0.3-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install tgsgapcloser

and update with:

conda update tgsgapcloser

or use the docker container:

docker pull quay.io/biocontainers/tgsgapcloser:<tag>

(see tgsgapcloser/tags for valid values for <tag>)