recipe tigmint

Correct misassemblies using linked reads

Homepage

https://bcgsc.github.io/tigmint/

Documentation

https://github.com/bcgsc/tigmint#readme

Developer docs

https://github.com/bcgsc/tigmint

License

GPL3 / GNU General Public v3 (GPLv3)

Recipe

/tigmint/meta.yaml

Links

doi: 10.1101/304253

package tigmint

(downloads) docker_tigmint

Versions

1.1.2-0

Depends intervaltree

Depends make

Depends pybedtools

Depends pysam

Depends python

>=3

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install tigmint

and update with:

conda update tigmint

or use the docker container:

docker pull quay.io/biocontainers/tigmint:<tag>

(see tigmint/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/tigmint/README.html)