recipe tirmite

Map TIR-pHMM models to genomic sequences for annotation of MITES and complete DNA-Transposons.

Homepage

https://github.com/Adamtaranto/TIRmite

License

MIT / MIT License

Recipe

/tirmite/meta.yaml

Build profile Hidden Markov Models for Terminal Inverted repeat families (TIR-pHMMs) and map to genomic sequences for annotation of MITES and complete DNA-Transposons with variable internal sequence composition.

package tirmite

(downloads) docker_tirmite

Versions

1.1.4-01.1.3-11.1.3-01.1.1-01.1.0-11.1.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install tirmite

and update with:

conda update tirmite

or use the docker container:

docker pull quay.io/biocontainers/tirmite:<tag>

(see tirmite/tags for valid values for <tag>)