recipe tophat

A spliced read mapper for RNA-Seq

Homepage

http://ccb.jhu.edu/software/tophat/index.shtml

License

Boost Software License

Recipe

/tophat/meta.yaml

package tophat

(downloads) docker_tophat

Versions

2.1.1-3, 2.1.1-2, 2.1.1-1, 2.1.1-0, 2.1.0-0, 2.0.13-4, 2.0.13-3, 2.0.13-2

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install tophat

and update with:

conda update tophat

or use the docker container:

docker pull quay.io/biocontainers/tophat:<tag>

(see tophat/tags for valid values for <tag>)