recipe tracknado

CLI library to generate UCSC trackhubs from sequencing data

Homepage:

https://pypi.org/project/tracknado/

License:

GPL3 / GPL-3.0-or-later

Recipe:

/tracknado/meta.yaml

package tracknado

versions:

0.2.4-0,  0.2.3-0

depends click:

depends cookiecutter:

depends loguru:

depends pandas:

depends pillow:

depends python:

>=3.7

depends seaborn:

depends trackhub:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install tracknado

and update with::

   mamba update tracknado

To create a new environment, run:

mamba create --name myenvname tracknado

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/tracknado:<tag>

(see `tracknado/tags`_ for valid values for ``<tag>``)

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