recipe transcomb

A sparse k-mer graph based, memory-efficient genome assembler

Homepage:

https://github.com/yechengxi/SparseAssembler

License:

Unknown

Recipe:

/transcomb/meta.yaml

package transcomb

Versions:

1.0-0

Depends:

• bamtools

• boost 1.60*

• icu ==56.1

• libgcc

• samtools

• zlib

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install transcomb

and update with:

conda update transcomb

or use the docker container:

docker pull quay.io/biocontainers/transcomb:<tag>

(see transcomb/tags for valid values for <tag>)

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Link to this page

Render an badge with the following MarkDown:

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