recipe transindel

transIndel is used to detect indels (insertions and deletions) from DNA-seq or RNA-seq data by parsing chimeric alignments from BWA-MEM..

Homepage

https://github.com/cauyrd/transIndel

License

GPL3 / GNU General Public License v3 or later (GPLv3+)

Recipe

/transindel/meta.yaml

package transindel

(downloads) docker_transindel

Versions

1.0-11.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install transindel

and update with:

conda update transindel

or use the docker container:

docker pull quay.io/biocontainers/transindel:<tag>

(see transindel/tags for valid values for <tag>)