recipe trf

Tandem Repeats Finder is a program to locate and display tandem repeats in DNA sequences.

Homepage:

https://tandem.bu.edu/trf/trf.html

License:

AGPL-3.0

Recipe:

/trf/meta.yaml

Links:

biotools: Trf

package trf

Versions:

4.09.1-4,  4.09.1-3,  4.09.1-2,  4.09.1-1,  4.09.1-0,  4.09-2,  4.09-1,  4.09-0,  4.07b-0

Depends:

• libgcc-ng >=12

Required By:

• kneaddata

• repeatscout

• saspector

• straglr

• etoki

• repeatmasker

• repeatmodeler

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install trf

and update with:

conda update trf

or use the docker container:

docker pull quay.io/biocontainers/trf:<tag>

(see trf/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/trf/README.html)