recipe triform2

Improved sensitivity, specificity and control of false discovery rates in ChIP-Seq peak finding.

Homepage:

http://github.com/endrebak/epic

License:

GNU General Public License v3 (GPLv3)

Recipe:

/triform2/meta.yaml

package triform2

Versions:

0.0.5-1,  0.0.5-0

Depends:

• bioconductor-biocgenerics

• bioconductor-genomicranges

• bioconductor-iranges

• bx-python

• joblib

• natsort

• numpy

• pandas

• python >=2.7,<2.8.0a0

• r-base >=3.4.1,<3.4.2.0a0

• rpy2 >=2.4.2

• scipy

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install triform2

and update with:

conda update triform2

or use the docker container:

docker pull quay.io/biocontainers/triform2:<tag>

(see triform2/tags for valid values for <tag>)

Download stats

Link to this page

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