recipe trinotate

Trinotate is a comprehensive annotation suite designed for automatic functional annotation of transcriptomes, particularly de novo assembled transcriptomes, from model or non-model organisms

Homepage:

https://trinotate.github.io/

License:

BSD

Recipe:

/trinotate/meta.yaml

package trinotate

Versions:

3.2.2-1,  3.2.2-0,  3.2.1-1,  3.2.1-0,  3.2.0-1,  3.2.0-0,  3.1.1-7,  3.1.1-6,  3.1.1-5, 

3.2.2-1,  3.2.2-0,  3.2.1-1,  3.2.1-0,  3.2.0-1,  3.2.0-0,  3.1.1-7,  3.1.1-6,  3.1.1-5,  3.1.1-4,  3.1.1-0,  3.1.0-0,  3.0.2-0,  3.0.1-1,  3.0.1-0

Depends:

• blast

• hmmer

• perl >=5.32.1,<6.0a0 *_perl5

• perl-app-cpanminus

• perl-dbd-sqlite

• perl-dbi

• perl-file-find-rule

• perl-module-build

• sqlite

• wget

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install trinotate

and update with:

conda update trinotate

or use the docker container:

docker pull quay.io/biocontainers/trinotate:<tag>

(see trinotate/tags for valid values for <tag>)

Download stats

Link to this page

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