recipe tritimap

Triti-Map is a Snakemake-based pipeline for gene mapping in Triticeae.

Homepage

https://github.com/fei0810/Triti-Map

Documentation

https://github.com/fei0810/Triti-Map/wiki

License

MIT

Recipe

/tritimap/meta.yaml

Triti-Map is a Snakemake-based pipeline for gene mapping in Triticeae, which contains a suite of user-friendly computational packages and web-interface integrating multi-omics data from Triticeae species including genomic, epigenomic, evolutionary and homologous information.

Triti-Map could efficiently explore trait-related genes or functional elements not present in the reference genome and reduce the time and labor required for gene mapping in large genome species.

package tritimap

(downloads) docker_tritimap

Versions

0.9.7-00.9.6-00.9.5-00.9.4-00.9.3-00.9.2-00.9.1-00.9.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install tritimap

and update with:

conda update tritimap

or use the docker container:

docker pull quay.io/biocontainers/tritimap:<tag>

(see tritimap/tags for valid values for <tag>)

Download stats