recipe ucsc-bigbedtobed

Convert from bigBed to ascii bed format.

Homepage

http://hgdownload.cse.ucsc.edu/admin/exe/

License

varies; see http://genome.ucsc.edu/license

Recipe

/ucsc-bigbedtobed/meta.yaml

package ucsc-bigbedtobed

Versions

377-1,  377-0,  366-0,  357-1,  357-0,  332-0,  324-0

Depends

• libgcc-ng >=7.5.0

• libpng >=1.6.37,<1.7.0a0

• libuuid >=2.32.1,<3.0a0

• mysql-connector-c >=6.1.11,<6.1.12.0a0

• openssl >=1.1.1g,<1.1.2a

• zlib >=1.2.11,<1.3.0a0

Required By

• metaseq-all

• cactus

• rgt

• hubward-all

• gimmemotifs

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ucsc-bigbedtobed

and update with:

conda update ucsc-bigbedtobed

or use the docker container:

docker pull quay.io/biocontainers/ucsc-bigbedtobed:<tag>

(see ucsc-bigbedtobed/tags for valid values for <tag>)

Link to this page

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