recipe ucsc-fatofastq

Convert fa to fastq format, just faking quality values.

Homepage

http://hgdownload.cse.ucsc.edu/admin/exe/

License

varies; see http://genome.ucsc.edu/license

Recipe

/ucsc-fatofastq/meta.yaml

package ucsc-fatofastq

Versions

377-0, 366-0, 357-2, 357-1, 357-0, 332-0

Depends

• libgcc-ng >=7.3.0

• libpng >=1.6.35,<1.7.0a0

• libuuid >=2.32.1,<3.0a0

• mysql-connector-c >=6.1.11,<6.1.12.0a0

• openssl >=1.0.2p,<1.0.3a

• zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install ucsc-fatofastq

and update with:

conda update ucsc-fatofastq

or use the docker container:

docker pull quay.io/biocontainers/ucsc-fatofastq:<tag>

(see ucsc-fatofastq/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

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