recipe ultra_bioinformatics

Splice aligner of long transcriptomic reads to genome.

Homepage:

https://github.com/ksahlin/uLTRA

License:

GPL3 / GNU GPLV3

Recipe:

/ultra_bioinformatics/meta.yaml

package ultra_bioinformatics

Versions:

0.0.4.1-0,  0.0.4-1,  0.0.4-0,  0.0.3.3-1,  0.0.3.3-0

Depends:

• dill

• edlib

• gffutils

• intervaltree

• minimap2

• mummer

• parasail-python

• pysam

• python

• python-edlib

• slamem

• strobemap

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install ultra_bioinformatics

and update with:

conda update ultra_bioinformatics

or use the docker container:

docker pull quay.io/biocontainers/ultra_bioinformatics:<tag>

(see ultra_bioinformatics/tags for valid values for <tag>)

Download stats

Link to this page

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