recipe ultraheatmap

ultraheatmaps facilitates the production of deepTools heatmaps

Homepage:

https://github.com/maxplanck-ie/ultraheatmap/

License:

MIT / MIT

Recipe:

/ultraheatmap/meta.yaml

package ultraheatmap

versions:

1.3.1-1,  1.3.0-1,  1.3.0-0,  1.2.2-0,  1.2.0-0,  1.1.0-0

depends bedtools:

>2

depends deeptools:

>3

depends gffutils:

depends pybedtools:

depends pybigwig:

depends pysam:

>=0.16.0.1

depends python:

>=3.6

depends pyyaml:

>=5.1

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install ultraheatmap

and update with::

   mamba update ultraheatmap

To create a new environment, run:

mamba create --name myenvname ultraheatmap

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/ultraheatmap:<tag>

(see `ultraheatmap/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ultraheatmap/README.html)