recipe unitas

unitas is a convenient tool for efficient annotation of small non-coding RNA sequence datasets produced by Next Generation Sequencing.

Homepage:

http://www.smallrnagroup.uni-mainz.de/software.html

License:

Creative Commons Attribution Non-Commercial License V2.0

Recipe:

/unitas/meta.yaml

Links:

doi: https://doi.org/10.1186/s12864-017-4031-9

package unitas

(downloads) docker_unitas

versions:

1.6.1-2,  1.6.1-1,  1.6.1-0

depends dnapi:

depends perl:

depends perl-archive-extract:

depends perl-file-path:

depends perl-getopt-long:

depends perl-lwp-simple:

depends perl-statistics-distributions:

depends seqmap:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install unitas

and update with::

   mamba update unitas

To create a new environment, run:

mamba create --name myenvname unitas

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/unitas:<tag>

(see `unitas/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/unitas/README.html)