recipe valet

Pipeline for detecting mis-assemblies in metagenomic assemblies

Homepage:

https://github.com/marbl/VALET

License:

MIT

Recipe:

/valet/meta.yaml

package valet

Versions:

1.0-5,  1.0-4,  1.0-3,  1.0-2,  1.0-1,  1.0-0

Depends:

• bedtools

• bowtie2

• numpy

• perl

• python <3

• r-base

• samtools

• scipy

• tbb 2020.2.*

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install valet

and update with:

conda update valet

or use the docker container:

docker pull quay.io/biocontainers/valet:<tag>

(see valet/tags for valid values for <tag>)

Download stats

Link to this page

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