recipe variantbreak

Structural variant analyzer for data visualization on VariantMap

Homepage:

https://github.com/cytham/variantbreak

License:

GPL3 / GNU General Public v3 (GPLv3)

Recipe:

/variantbreak/meta.yaml

package variantbreak

Versions:

1.0.4-0,  1.0.3-0

Depends:

• bedtools >=2.26.0

• fastcluster >=1.1.26

• numpy >=1.18.3

• pandas >=1.0.3

• pybedtools >=0.8.1

• pysam >=0.15.3

• pytables >=3.6.1

• python >=3.6

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install variantbreak

and update with:

conda update variantbreak

or use the docker container:

docker pull quay.io/biocontainers/variantbreak:<tag>

(see variantbreak/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/variantbreak/README.html)