recipe vcfpy

Python 3 VCF library with good support for both reading and writing

Homepage:

https://github.com/bihealth/vcfpy

License:

MIT / MIT

Recipe:

/vcfpy/meta.yaml

package vcfpy

Versions:

0.13.6-0,  0.13.5-0,  0.13.4-0,  0.13.3-0,  0.13.2-0,  0.13.0-0,  0.12.2-0,  0.12.1-0,  0.12.0-3, 

0.13.6-0,  0.13.5-0,  0.13.4-0,  0.13.3-0,  0.13.2-0,  0.13.0-0,  0.12.2-0,  0.12.1-0,  0.12.0-3,  0.11.2-3,  0.11.2-2,  0.11.2-0,  0.11.1-0,  0.11.0-1,  0.11.0-0

Depends:

• pysam >=0.10.0

• python >=3

Required By:

• clsify

• genomics-data-index

• sequana

• civicpy

• tb_variant_filter

• mobidic-mpa

• ngs-chew

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install vcfpy

and update with:

conda update vcfpy

or use the docker container:

docker pull quay.io/biocontainers/vcfpy:<tag>

(see vcfpy/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/vcfpy/README.html)