recipe vcftools

A set of tools written in Perl and C++ for working with VCF files.

Homepage:

https://vcftools.github.io/

License:

LGPL

Recipe:

/vcftools/meta.yaml

Links:

biotools: vcftools

package vcftools

Versions:

0.1.16-9,  0.1.16-8,  0.1.16-7,  0.1.16-6,  0.1.16-5,  0.1.16-4,  0.1.16-3,  0.1.16-2,  0.1.15-2, 

0.1.16-9,  0.1.16-8,  0.1.16-7,  0.1.16-6,  0.1.16-5,  0.1.16-4,  0.1.16-3,  0.1.16-2,  0.1.15-2,  0.1.15-1,  0.1.15-0,  0.1.14-5,  0.1.14-4,  0.1.14-3,  0.1.14-2,  0.1.14-1,  0.1.14-0,  0.1.12b-3,  0.1.12b-2,  0.1.12b-1,  0.1.12b-0,  0.1.11-2,  0.1.11-1,  0.1.11-0,  0.1.10-1,  0.1.10-0

Depends:

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• perl >=5.32.1,<5.33.0a0 *_perl5

• zlib

Required By:

• augur

• ddocent

• vsnp3

• snvphyl-tools

• uvp

• cap-mirseq

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install vcftools

and update with:

conda update vcftools

or use the docker container:

docker pull quay.io/biocontainers/vcftools:<tag>

(see vcftools/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/vcftools/README.html)