recipe vulcan

vulcan, map long reads and prosper🖖, a long read mapping pipeline that melds minimap2 and NGMLR

Homepage:

https://gitlab.com/treangenlab/vulcan

License:

MIT

Recipe:

/vulcan/meta.yaml

package vulcan

Versions:

1.0.3-0,  1.0.2-1,  1.0.2-0,  1.0.1-0

Depends:

• bamtools

• minimap2

• ngmlr

• numpy

• pysam

• python >=3.5

• samtools 1.9

• tqdm

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install vulcan

and update with:

conda update vulcan

or use the docker container:

docker pull quay.io/biocontainers/vulcan:<tag>

(see vulcan/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/vulcan/README.html)