recipe yamda

A highly scalable GPU-accelerated de novo motif discovery software package

Homepage:

https://github.com/daquang/YAMDA

License:

MIT

Recipe:

/yamda/meta.yaml

Links:

biotools: yamda

package yamda

Versions:

0.1.00e9c9d-0

Depends:

• bedtools

• biopython

• numpy

• pyfaidx

• python >=3

• pytorch

• scipy

• torchvision

• tqdm

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install yamda

and update with:

conda update yamda

or use the docker container:

docker pull quay.io/biocontainers/yamda:<tag>

(see yamda/tags for valid values for <tag>)

Download stats

Link to this page

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