- recipe advntr
A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data
- Homepage:
- License:
BSD 3-Clause
- Recipe:
- package advntr¶
-
- Versions:
1.5.0-0
,1.4.1-2
,1.4.1-1
,1.4.1-0
,1.4.0-2
,1.4.0-1
,1.4.0-0
,1.3.3-2
,1.3.3-1
,1.5.0-0
,1.4.1-2
,1.4.1-1
,1.4.1-0
,1.4.0-2
,1.4.0-1
,1.4.0-0
,1.3.3-2
,1.3.3-1
,1.3.3-0
,1.3.2-1
,1.3.2-0
,1.3.1-0
,1.3.0-1
,1.2.0-0
,1.1.1-1
,1.1.1-0
,1.1.0-1
,1.1.0-0
,1.0.3-0
- Depends:
htslib
1.9.*
keras
2.2.4.*
libgcc-ng
>=12
libstdcxx-ng
>=12
muscle
3.8.1551.*
networkx
1.11.*
numpy
>=1.16.5,<2.0a0
pysam
0.15.1.*
python
>=2.7,<2.8.0a0
python_abi
2.7.* *_cp27mu
scipy
>=1.2.1,<2.0a0
tensorflow
1.13.1.*
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install advntr
and update with:
conda update advntr
or use the docker container:
docker pull quay.io/biocontainers/advntr:<tag>
(see advntr/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/advntr/README.html)