- recipe antismash
antiSMASH - the antibiotics and Secondary Metabolite Analysis SHell
- Homepage
- Documentation
- Developer docs
- License
AGPL / AGPL-3.0
- Recipe
- Links
biotools: antismash, doi: 10.1093/nar/gkr466, doi: 10.1093/nar/gkt449, doi: 10.1093/nar/gkv437, doi: 10.1093/nar/gkx319, doi: 10.1093/nar/gkz310, doi: 10.1093/nar/gkab335, usegalaxy-eu: antismash
antiSMASH allows the rapid genome-wide identification, annotation and analysis of secondary metabolite biosynthesis gene clusters.
- package antismash¶
-
- Versions
6.1.0-0
,6.0.1-0
,6.0.0-0
,5.1.2-4
,5.1.2-3
,5.1.2-2
,5.1.2-1
,5.1.2-0
,5.1.1-0
,6.1.0-0
,6.0.1-0
,6.0.0-0
,5.1.2-4
,5.1.2-3
,5.1.2-2
,5.1.2-1
,5.1.2-0
,5.1.1-0
,4.2.0-2
,4.2.0-1
,4.1.0-1
,4.1.0-0
,4.0.2-3
,4.0.2-2
,4.0.2-1
,4.0.1-1
- Depends
biopython
1.78.*
diamond
0.9.*
fasttree
2.1.*
glimmerhmm
3.0.*
helperlibs
>=0.2.0
hmmer
3.1b2
markupsafe
>=2.0
meme
<=4.11.2
muscle
3.8.*
python
>=3.7
scikit-learn
>=0.19
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install antismash
and update with:
conda update antismash
or use the docker container:
docker pull quay.io/biocontainers/antismash:<tag>
(see antismash/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/antismash/README.html)