- recipe bioconductor-arraymvout
multivariate outlier detection for expression array QA
- Homepage:
https://bioconductor.org/packages/3.14/bioc/html/arrayMvout.html
- License:
Artistic-2.0
- Recipe:
This package supports the application of diverse quality metrics to AffyBatch instances, summarizing these metrics via PCA, and then performing parametric outlier detection on the PCs to identify aberrant arrays with a fixed Type I error rate
- package bioconductor-arraymvout¶
-
- Versions:
1.52.0-0
,1.50.0-0
,1.48.0-1
,1.48.0-0
,1.46.0-0
,1.44.0-0
,1.42.0-1
,1.40.0-0
- Depends:
bioconductor-affy
>=1.72.0,<1.73.0
bioconductor-affycontam
>=1.52.0,<1.53.0
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-lumi
>=2.46.0,<2.47.0
bioconductor-mdqc
>=1.56.0,<1.57.0
bioconductor-parody
>=1.52.0,<1.53.0
r-base
>=4.1,<4.2.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-arraymvout
and update with:
conda update bioconductor-arraymvout
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-arraymvout:<tag>
(see bioconductor-arraymvout/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-arraymvout/README.html)