recipe bioconductor-cghmcr

Find chromosome regions showing common gains/losses

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/cghMCR.html

License:

LGPL

Recipe:

/bioconductor-cghmcr/meta.yaml

Links:

biotools: cghmcr, doi: 10.1093/bioinformatics/btv298

This package provides functions to identify genomic regions of interests based on segmented copy number data from multiple samples.

package bioconductor-cghmcr

(downloads) docker_bioconductor-cghmcr

Versions:
1.56.0-01.52.0-01.50.0-01.48.0-11.48.0-01.46.0-01.44.0-01.42.0-11.40.0-0

1.56.0-01.52.0-01.50.0-01.48.0-11.48.0-01.46.0-01.44.0-01.42.0-11.40.0-01.38.0-01.36.0-01.34.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-cghmcr

and update with:

conda update bioconductor-cghmcr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cghmcr:<tag>

(see bioconductor-cghmcr/tags for valid values for <tag>)

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