- recipe bioconductor-chipexoqual
ChIPexoQual
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/ChIPexoQual.html
- License:
GPL (>=2)
- Recipe:
Package with a quality control pipeline for ChIP-exo/nexus data.
- package bioconductor-chipexoqual¶
-
- Versions:
1.22.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.14.0-0
,1.12.0-0
,1.10.0-0
,1.8.0-1
,1.6.0-0
- Depends:
bioconductor-biocparallel
>=1.32.0,<1.33.0
bioconductor-biovizbase
>=1.46.0,<1.47.0
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-genomicalignments
>=1.34.0,<1.35.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-rsamtools
>=2.14.0,<2.15.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
r-base
>=4.2,<4.3.0a0
r-broom
>=0.4
r-data.table
>=1.9.6
r-dplyr
>=0.5
r-ggplot2
>=1.0
r-hexbin
>=1.27
r-rcolorbrewer
>=1.1
r-scales
>=0.4.0
r-viridis
>=0.3
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-chipexoqual
and update with:
conda update bioconductor-chipexoqual
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-chipexoqual:<tag>
(see bioconductor-chipexoqual/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-chipexoqual/README.html)