recipe bioconductor-decipher

Tools for curating, analyzing, and manipulating biological sequences

Homepage

https://bioconductor.org/packages/3.11/bioc/html/DECIPHER.html

License

GPL-3

Recipe

/bioconductor-decipher/meta.yaml

Links

biotools: DECIPHER

A toolset for deciphering and managing biological sequences.

package bioconductor-decipher

Versions

2.16.0-0,  2.14.0-0,  2.12.0-1,  2.10.0-0,  2.8.1-0,  2.6.0-1,  2.6.0-0

Depends

• bioconductor-biostrings >=2.56.0,<2.57.0

• bioconductor-iranges >=2.22.0,<2.23.0

• bioconductor-s4vectors >=0.26.0,<0.27.0

• bioconductor-xvector >=0.28.0,<0.29.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=7.3.0

• liblapack >=3.8.0,<3.9.0a0

• r-base >=4.0,<4.1.0a0

• r-dbi

• r-rsqlite >=1.1

Required By

• bioconductor-assessorf

• bioconductor-microbiotaprocess

• catch_chimera

• bioconductor-metagenomefeatures

• bioconductor-openprimer

• bioconductor-synextend

• bioconductor-assessorfdata

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-decipher

and update with:

conda update bioconductor-decipher

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-decipher:<tag>

(see bioconductor-decipher/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-decipher/README.html)