recipe bioconductor-decipher

Tools for curating, analyzing, and manipulating biological sequences

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/DECIPHER.html

License:

GPL-3

Recipe:

/bioconductor-decipher/meta.yaml

Links:

biotools: DECIPHER

A toolset for deciphering and managing biological sequences.

package bioconductor-decipher

Versions:

2.22.0-1,  2.22.0-0,  2.20.0-0,  2.18.1-0,  2.18.0-0,  2.16.0-0,  2.14.0-0,  2.12.0-1,  2.10.0-0, 

2.22.0-1,  2.22.0-0,  2.20.0-0,  2.18.1-0,  2.18.0-0,  2.16.0-0,  2.14.0-0,  2.12.0-1,  2.10.0-0,  2.8.1-0,  2.6.0-1,  2.6.0-0

Depends:

• bioconductor-biostrings >=2.62.0,<2.63.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• bioconductor-xvector >=0.34.0,<0.35.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=10.3.0

• liblapack >=3.8.0,<4.0a0

• r-base >=4.1,<4.2.0a0

• r-dbi

• r-rsqlite >=1.1

Required By:

• catch_chimera

• bioconductor-assessorf

• bioconductor-openprimer

• bioconductor-sangeranalyser

• bioconductor-mia

• dadaist2

• bioconductor-assessorfdata

• bioconductor-synextend

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-decipher

and update with:

conda update bioconductor-decipher

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-decipher:<tag>

(see bioconductor-decipher/tags for valid values for <tag>)

Download stats

Link to this page

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