recipe bioconductor-flowbin

Combining multitube flow cytometry data by binning

Homepage

https://bioconductor.org/packages/3.11/bioc/html/flowBin.html

License

Artistic-2.0

Recipe

/bioconductor-flowbin/meta.yaml

Software to combine flow cytometry data that has been multiplexed into multiple tubes with common markers between them, by establishing common bins across tubes in terms of the common markers, then determining expression within each tube for each bin in terms of the tube-specific markers.

package bioconductor-flowbin

Versions

1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0

Depends

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• bioconductor-flowcore >=2.0.0,<2.1.0

• bioconductor-flowfp >=1.46.0,<1.47.0

• bioconductor-limma >=3.44.0,<3.45.0

• r-base >=4.0,<4.1.0a0

• r-class

• r-snow

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-flowbin

and update with:

conda update bioconductor-flowbin

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-flowbin:<tag>

(see bioconductor-flowbin/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-flowbin/README.html)