- recipe bioconductor-genega
Design gene based on both mRNA secondary structure and codon usage bias using Genetic algorithm
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/GeneGA.html
- License:
GPL version 2
- Recipe:
- Links:
biotools: genega, doi: 10.1186/1748-7188-6-26
R based Genetic algorithm for gene expression optimization by considering both mRNA secondary structure and codon usage bias, GeneGA includes the information of highly expressed genes of almost 200 genomes. Meanwhile, Vienna RNA Package is needed to ensure GeneGA to function properly.
- package bioconductor-genega¶
-
- Versions:
1.48.0-0
,1.44.0-0
,1.42.0-0
,1.40.0-1
,1.40.0-0
,1.38.0-0
,1.36.0-0
,1.34.0-1
,1.34.0-0
,1.48.0-0
,1.44.0-0
,1.42.0-0
,1.40.0-1
,1.40.0-0
,1.38.0-0
,1.36.0-0
,1.34.0-1
,1.34.0-0
,1.32.0-0
,1.30.0-0
,1.28.0-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-genega
and update with:
conda update bioconductor-genega
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-genega:<tag>
(see bioconductor-genega/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-genega/README.html)