- recipe bioconductor-genetclassifier
Classify diseases and build associated gene networks using gene expression profiles
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/geNetClassifier.html
- License
GPL (>= 2)
- Recipe
- Links
biotools: genetclassifier
Comprehensive package to automatically train and validate a multi-class SVM classifier based on gene expression data. Provides transparent selection of gene markers, their coexpression networks, and an interface to query the classifier.
- package bioconductor-genetclassifier¶
-
- Versions
1.34.0-0
,1.32.0-0
,1.30.0-1
,1.30.0-0
,1.28.0-0
,1.26.0-0
,1.24.0-1
,1.22.0-0
,1.20.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-1
,1.30.0-0
,1.28.0-0
,1.26.0-0
,1.24.0-1
,1.22.0-0
,1.20.0-0
,1.18.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-ebarrays
>=2.58.0,<2.59.0
bioconductor-minet
>=3.52.0,<3.53.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-genetclassifier
and update with:
conda update bioconductor-genetclassifier
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-genetclassifier:<tag>
(see bioconductor-genetclassifier/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-genetclassifier/README.html)