recipe bioconductor-interactionset

Base Classes for Storing Genomic Interaction Data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/InteractionSet.html

License

GPL-3

Recipe

/bioconductor-interactionset/meta.yaml

Links

biotools: interactionset

Provides the GInteractions, InteractionSet and ContactMatrix objects and associated methods for storing and manipulating genomic interaction data from Hi-C and ChIA-PET experiments.

package bioconductor-interactionset

(downloads) docker_bioconductor-interactionset

Versions

1.16.0-01.14.0-01.12.0-11.10.0-01.8.0-01.6.0-01.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-interactionset

and update with:

conda update bioconductor-interactionset

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-interactionset:<tag>

(see bioconductor-interactionset/tags for valid values for <tag>)