- recipe bioconductor-isobar
Analysis and quantitation of isobarically tagged MSMS proteomics data
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/isobar.html
- License
LGPL-2
- Recipe
isobar provides methods for preprocessing, normalization, and report generation for the analysis of quantitative mass spectrometry proteomics data labeled with isobaric tags, such as iTRAQ and TMT. Features modules for integrating and validating PTM-centric datasets (isobar-PTM). More information on http://www.ms-isobar.org.
- package bioconductor-isobar¶
-
- Versions
1.40.0-0
,1.38.0-0
,1.36.0-1
,1.36.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-1
,1.28.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-biomart
>=2.50.0,<2.51.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-isobar
and update with:
conda update bioconductor-isobar
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-isobar:<tag>
(see bioconductor-isobar/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-isobar/README.html)