-
recipe
bioconductor-minfi¶ Tools to analyze & visualize Illumina Infinium methylation arrays.
- Homepage
- License
Artistic-2.0
- Recipe
- Links
biotools: minfi
-
package
bioconductor-minfi¶ 
- Versions
1.28.0-0, 1.26.2-0, 1.24.0-0, 1.22.1-0, 1.20.0-0, 1.16.1-0
- Depends bioconductor-biobase
>=2.42.0,<2.43.0
- Depends bioconductor-biocgenerics
>=0.28.0,<0.29.0
- Depends bioconductor-biocparallel
>=1.16.0,<1.17.0
- Depends bioconductor-biostrings
>=2.50.0,<2.51.0
- Depends bioconductor-bumphunter
>=1.24.0,<1.25.0
- Depends bioconductor-delayedarray
>=0.8.0,<0.9.0
- Depends bioconductor-delayedmatrixstats
>=1.4.0,<1.5.0
- Depends bioconductor-genefilter
>=1.64.0,<1.65.0
- Depends bioconductor-genomeinfodb
>=1.18.0,<1.19.0
- Depends bioconductor-genomicranges
>=1.34.0,<1.35.0
- Depends bioconductor-geoquery
>=2.50.0,<2.51.0
- Depends bioconductor-hdf5array
>=1.10.0,<1.11.0
- Depends bioconductor-illuminaio
>=0.24.0,<0.25.0
- Depends bioconductor-iranges
>=2.16.0,<2.17.0
- Depends bioconductor-limma
>=3.38.0,<3.39.0
- Depends bioconductor-preprocesscore
>=1.44.0,<1.45.0
- Depends bioconductor-s4vectors
>=0.20.0,<0.21.0
- Depends bioconductor-siggenes
>=1.56.0,<1.57.0
- Depends bioconductor-summarizedexperiment
>=1.12.0,<1.13.0
- Depends r-base
>=3.5.1,<3.5.2.0a0
- Depends r-beanplot
- Depends r-data.table
- Depends r-lattice
- Depends r-mass
- Depends r-mclust
- Depends r-nlme
- Depends r-nor1mix
- Depends r-quadprog
- Depends r-rcolorbrewer
- Depends r-reshape
- Requirements
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-minfi
and update with:
conda update bioconductor-minfi
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-minfi:<tag>
(see bioconductor-minfi/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-minfi/README.html)