- recipe bioconductor-minfi
Analyze Illumina Infinium DNA methylation arrays
- Homepage:
- License:
Artistic-2.0
- Recipe:
- Links:
biotools: minfi
Tools to analyze & visualize Illumina Infinium methylation arrays.
- package bioconductor-minfi¶
-
- Versions:
1.44.0-0
,1.40.0-0
,1.38.0-0
,1.36.0-1
,1.36.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-1
,1.28.0-0
,1.44.0-0
,1.40.0-0
,1.38.0-0
,1.36.0-1
,1.36.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-1
,1.28.0-0
,1.26.2-0
,1.24.0-0
,1.22.1-0
,1.20.0-0
,1.16.1-0
- Depends:
bioconductor-biobase
>=2.58.0,<2.59.0
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-biocparallel
>=1.32.0,<1.33.0
bioconductor-biostrings
>=2.66.0,<2.67.0
bioconductor-bumphunter
>=1.40.0,<1.41.0
bioconductor-delayedarray
>=0.24.0,<0.25.0
bioconductor-delayedmatrixstats
>=1.20.0,<1.21.0
bioconductor-genefilter
>=1.80.0,<1.81.0
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-geoquery
>=2.66.0,<2.67.0
bioconductor-hdf5array
>=1.26.0,<1.27.0
bioconductor-illuminaio
>=0.40.0,<0.41.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-limma
>=3.54.0,<3.55.0
bioconductor-preprocesscore
>=1.60.0,<1.61.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
bioconductor-siggenes
>=1.72.0,<1.73.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-minfi
and update with:
conda update bioconductor-minfi
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-minfi:<tag>
(see bioconductor-minfi/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-minfi/README.html)