- recipe bioconductor-mirsm
Inferring miRNA sponge modules in heterogeneous data
- Homepage
- License
GPL-3
- Recipe
The package aims to identify miRNA sponge modules in heterogeneous data. It provides several functions to study miRNA sponge modules, including popular methods for inferring gene modules (candidate miRNA sponge modules), and a function to identify miRNA sponge modules, as well as several functions to conduct modular analysis of miRNA sponge modules.
- package bioconductor-mirsm¶
-
- Versions
1.12.0-1
,1.12.0-0
,1.10.0-0
,1.8.3-0
,1.8.0-0
,1.4.0-0
,1.2.0-1
- Depends
bioconductor-bicare
>=1.52.0,<1.53.0
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-fabia
>=2.40.0,<2.41.0
bioconductor-gseabase
>=1.56.0,<1.57.0
bioconductor-ibbig
>=1.38.0,<1.39.0
bioconductor-mirsponger
>=1.20.0,<1.21.0
bioconductor-org.hs.eg.db
>=3.14.0,<3.15.0
bioconductor-rqubic
>=1.40.0,<1.41.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=10.3.0
liblapack
>=3.8.0,<4.0a0
libstdcxx-ng
>=10.3.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-mirsm
and update with:
conda update bioconductor-mirsm
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-mirsm:<tag>
(see bioconductor-mirsm/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-mirsm/README.html)