bioconductor-oppar¶
The R implementation of mCOPA package published by Wang et al. (2012). Oppar provides methods for Cancer Outlier profile Analysis. Although initially developed to detect outlier genes in cancer studies, methods presented in oppar can be used for outlier profile analysis in general. In addition, tools are provided for gene set enrichment and pathway analysis.
| Home | http://bioconductor.org/packages/3.7/bioc/html/oppar.html |
| Versions | 1.8.0, 1.6.0, 1.4.0 |
| License | GPL-2 |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-oppar |
| Links | biotools: oppar |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-oppar
and update with:
conda update bioconductor-oppar
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-oppar.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-oppar/README.html)
