- recipe bioconductor-qckitfastq
FASTQ Quality Control
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/qckitfastq.html
- License
Artistic-2.0
- Recipe
Assessment of FASTQ file format with multiple metrics including quality score, sequence content, overrepresented sequence and Kmers.
- package bioconductor-qckitfastq¶
-
- Versions
1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-2
,1.6.0-1
,1.6.0-0
,1.4.0-0
,1.2.0-0
,1.0.0-1
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-2
,1.6.0-1
,1.6.0-0
,1.4.0-0
,1.2.0-0
,1.0.0-1
,1.0.0-0
- Depends
bioconductor-rseqan
>=1.14.0,<1.15.0
bioconductor-seqtools
>=1.28.0,<1.29.0
bioconductor-zlibbioc
>=1.40.0,<1.41.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=10.3.0
liblapack
>=3.8.0,<4.0a0
libstdcxx-ng
>=10.3.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-qckitfastq
and update with:
conda update bioconductor-qckitfastq
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-qckitfastq:<tag>
(see bioconductor-qckitfastq/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-qckitfastq/README.html)