- recipe bioconductor-rcellminer
rcellminer: Molecular Profiles, Drug Response, and Chemical Structures for the NCI-60 Cell Lines
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/rcellminer.html
- License
LGPL-3 + file LICENSE
- Recipe
The NCI-60 cancer cell line panel has been used over the course of several decades as an anti-cancer drug screen. This panel was developed as part of the Developmental Therapeutics Program (DTP, http://dtp.nci.nih.gov/) of the U.S. National Cancer Institute (NCI). Thousands of compounds have been tested on the NCI-60, which have been extensively characterized by many platforms for gene and protein expression, copy number, mutation, and others (Reinhold, et al., 2012). The purpose of the CellMiner project (http://discover.nci.nih.gov/ cellminer) has been to integrate data from multiple platforms used to analyze the NCI-60 and to provide a powerful suite of tools for exploration of NCI-60 data.
- package bioconductor-rcellminer¶
-
- Versions
2.16.0-0
,2.14.0-0
,2.12.1-0
,2.11.1-0
,2.10.0-0
,2.8.0-1
,2.6.0-1
,2.4.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-rcellminerdata
>=2.16.0,<2.17.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-rcellminer
and update with:
conda update bioconductor-rcellminer
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-rcellminer:<tag>
(see bioconductor-rcellminer/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-rcellminer/README.html)