recipe bioconductor-rcellminer

The NCI-60 cancer cell line panel has been used over the course of several decades as an anti-cancer drug screen. This panel was developed as part of the Developmental Therapeutics Program (DTP, http://dtp.nci.nih.gov/) of the U.S. National Cancer Institute (NCI). Thousands of compounds have been tested on the NCI-60, which have been extensively characterized by many platforms for gene and protein expression, copy number, mutation, and others (Reinhold, et al., 2012). The purpose of the CellMiner project (http://discover.nci.nih.gov/ cellminer) has been to integrate data from multiple platforms used to analyze the NCI-60 and to provide a powerful suite of tools for exploration of NCI-60 data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/rcellminer.html

License

LGPL-3 + file LICENSE

Recipe

/bioconductor-rcellminer/meta.yaml

package bioconductor-rcellminer

(downloads) docker_bioconductor-rcellminer

Versions

2.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rcellminer

and update with:

conda update bioconductor-rcellminer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rcellminer:<tag>

(see bioconductor-rcellminer/tags for valid values for <tag>)