- recipe bioconductor-safe
Significance Analysis of Function and Expression
- Homepage
- License
GPL (>= 2)
- Recipe
- Links
biotools: safe, doi: 10.1093/bioinformatics/bti260
SAFE is a resampling-based method for testing functional categories in gene expression experiments. SAFE can be applied to 2-sample and multi-class comparisons, or simple linear regressions. Other experimental designs can also be accommodated through user-defined functions.
- package bioconductor-safe¶
-
- Versions
3.34.0-0
,3.32.0-0
,3.30.0-1
,3.30.0-0
,3.27.0-0
,3.26.0-0
,3.24.0-1
,3.22.0-0
,3.20.0-0
,3.34.0-0
,3.32.0-0
,3.30.0-1
,3.30.0-0
,3.27.0-0
,3.26.0-0
,3.24.0-1
,3.22.0-0
,3.20.0-0
,3.18.0-0
,3.16.0-0
- Depends
bioconductor-annotationdbi
>=1.56.0,<1.57.0
bioconductor-biobase
>=2.54.0,<2.55.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-safe
and update with:
conda update bioconductor-safe
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-safe:<tag>
(see bioconductor-safe/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-safe/README.html)