recipe bioconductor-sctensor

Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition

Homepage

https://bioconductor.org/packages/3.11/bioc/html/scTensor.html

License

Artistic-2.0

Recipe

/bioconductor-sctensor/meta.yaml

The algorithm is based on the non-negative tucker decomposition (NTD2) of nnTensor.

package bioconductor-sctensor

(downloads) docker_bioconductor-sctensor

Versions

1.4.0-01.2.0-01.0.12-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-sctensor

and update with:

conda update bioconductor-sctensor

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sctensor:<tag>

(see bioconductor-sctensor/tags for valid values for <tag>)