- recipe bioconductor-waddr
Statistical tests for detecting differential distributions based on the 2-Wasserstein distance
- Homepage:
- License:
MIT + file LICENSE
- Recipe:
The package offers statistical tests based on the 2-Wasserstein distance for detecting and characterizing differences between two distributions given in the form of samples. Functions for calculating the 2-Wasserstein distance and testing for differential distributions are provided, as well as a specifically tailored test for differential expression in single-cell RNA sequencing data.
- package bioconductor-waddr¶
-
- Versions:
1.8.0-1
,1.8.0-0
,1.6.1-0
,1.4.0-1
,1.4.0-0
,1.2.0-0
,1.0.0-0
- Depends:
bioconductor-biocfilecache
>=2.2.0,<2.3.0
bioconductor-biocparallel
>=1.28.0,<1.29.0
bioconductor-singlecellexperiment
>=1.16.0,<1.17.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=10.3.0
liblapack
>=3.8.0,<4.0a0
libstdcxx-ng
>=10.3.0
r-arm
>=1.10-1
r-base
>=4.1,<4.2.0a0
r-rcpp
>=1.0.1
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-waddr
and update with:
conda update bioconductor-waddr
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-waddr:<tag>
(see bioconductor-waddr/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-waddr/README.html)