recipe chromosight

Detect loops (and other patterns) in Hi-C contact maps.

Homepage

https://github.com/koszullab/chromosight

License

OTHER / Artistic

Recipe

/chromosight/meta.yaml

package chromosight

(downloads) docker_chromosight

Versions
1.2.0-01.1.4-01.1.3-01.1.2-01.1.1-01.1.0-01.0.0-00.9.9-00.9.8-0

1.2.0-01.1.4-01.1.3-01.1.2-01.1.1-01.1.0-01.0.0-00.9.9-00.9.8-00.9.7-00.9.5-00.9.3-00.9.2-00.9.1-00.9.0-00.8.2-00.8.0-00.7.3-00.7.2-00.7.1-00.7.0-00.6.0-00.5.2-00.5.1-00.5.0-00.4.0-00.3.1-00.3.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install chromosight

and update with:

conda update chromosight

or use the docker container:

docker pull quay.io/biocontainers/chromosight:<tag>

(see chromosight/tags for valid values for <tag>)