- recipe entrez-direct
Entrez Direct (EDirect) is an advanced method for accessing the NCBI's set of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a UNIX terminal window. Functions take search terms from command-line arguments. Individual operations are combined to build multi-step queries. Record retrieval and formatting normally complete the process.
- Homepage:
ftp://ftp.ncbi.nlm.nih.gov/entrez/entrezdirect/versions/16.2.20211103/README
- License:
PUBLIC DOMAIN
- Recipe:
- package entrez-direct¶
-
- Versions:
16.2-1
,16.2-0
,15.6-1
,15.6-0
,13.9-2
,13.9-1
,13.9-0
,13.8-0
,13.3-0
,16.2-1
,16.2-0
,15.6-1
,15.6-0
,13.9-2
,13.9-1
,13.9-0
,13.8-0
,13.3-0
,11.0-2
,11.0-1
,11.0-0
,10.2-0
,10.0-0
,7.70-2
,7.70-1
,7.70-0
,7.00-1
,7.00-0
,5.80-0
,4.00-1
,4.00-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install entrez-direct
and update with:
conda update entrez-direct
or use the docker container:
docker pull quay.io/biocontainers/entrez-direct:<tag>
(see entrez-direct/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/entrez-direct/README.html)