recipe epic2

Ultraperformant Chip-Seq broad domain finder based on SICER.

Homepage

http://github.com/endrebak/epic2

License

MIT

Recipe

/epic2/meta.yaml

Links

doi: 10.1093/bioinformatics/btz232

package epic2

Versions

0.0.41-3,  0.0.41-2,  0.0.41-1,  0.0.41-0,  0.0.40-0,  0.0.39-0,  0.0.37-0,  0.0.36-0,  0.0.35-0, 

0.0.41-3,  0.0.41-2,  0.0.41-1,  0.0.41-0,  0.0.40-0,  0.0.39-0,  0.0.37-0,  0.0.36-0,  0.0.35-0,  0.0.34-0,  0.0.33-0,  0.0.26-0,  0.0.16-0,  0.0.15-0

Depends

• functools32

• htslib >=1.10.2,<1.11.0a0

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• natsort

• numpy

• pysam

• python >=2.7,<2.8.0a0

• python_abi 2.7.* *_cp27mu

• scipy

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install epic2

and update with:

conda update epic2

or use the docker container:

docker pull quay.io/biocontainers/epic2:<tag>

(see epic2/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/epic2/README.html)