recipe estmapper

Software package for the high-throughput alignment of large cDNA (EST, mRNA) sequence sets to a large eukaryotic genome of the same species.

Homepage

http://kmer.sourceforge.net/wiki/index.php/Getting_Started_with_ESTmapper

License

GPL

Recipe

/estmapper/meta.yaml

package estmapper

(downloads) docker_estmapper

Versions

2008-2, 2008-1, 2008-0

Depends

  • bzip2 >=1.0.6,<2.0a0

  • libgcc-ng >=4.9

  • libstdcxx-ng >=4.9

  • perl >=5.26.2,<5.26.3.0a0

  • python >=2.7,<2.8.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install estmapper

and update with:

conda update estmapper

or use the docker container:

docker pull quay.io/biocontainers/estmapper:<tag>

(see estmapper/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/estmapper/README.html)